Cliff Shaffer's Presentations and Posters

Here are some presentations and posters that I have created or coauthored.

Posters

  1. J. Park and C.A. Shaffer, AlgoViz.org: An Online Educational Community for Algorithm Visualizations", REU student project presentation, 2009.
  2. C.A. Shaffer, M. Agarwal, A. Kumar, and S.H. Edwards, Going Beyond Algorithm Visualization to Algorithm Exploration, presented at SIGCSE'08, Portland, Oregon, March 2008.
  3. R. Randhawa, C.A. Shaffer, and J.J. Tyson, Composition and Aggregation for Molecular Network Modeling, presented at the Seventh International Conference on Systems Biology, Yokohama, Japan, October 2006.

Research-related Presentations

  1. The AlgoViz Project, presented to REU summer students at University of Wisconsin, Oshkosh, July 2009.
  2. Computer Science Education Research, presented to the CS Departmental Seminar, April 17, 2009.
  3. R. Randhawa, C.A. Shaffer, and J.J. Tyson, Fusing and Composing Macromolecular Regulatory Network Models, presented at 2007 High Performance Computing Symposium (HPC 2007), Norfolk, VA, March 2007.
  4. C.A. Shaffer, R. Randhawa, and J.J. Tyson, The Role of Composition and Aggregation in Modeling Macromolecular Regulatory Networks, presented at the 2006 Winter Simulation Conference, Monterey, CA, December 2006.
  5. Modeling the Cell Cycle with JigCell and DARPA’s BioSPICE Software, presented at Workshop on Pathway Databases and Modeling Tools, Princeton University, June 2006.
  6. T.D Panning, L.T. Watson, N.A. Allen, C.A. Shaffer, and J.J Tyson, Deterministic Global Parameter Estimation for a Budding Yeast Model, presented at 2006 High Performance Computing Symposium (HPC'06), Huntsville, AL, April 2006.
  7. Beyond SBML, presented at the 3rd Annual Systems Biology Markup Language Hackathon, Tokyo, Japan, May 2005.
  8. User Interface Paradigms for Describing Pathway Models, presented at "Formal Languages for Biological Processes," Banbury Conference, Cold Spring Harbor Lab, April 2003.
  9. The DARPA BioSPICE Project, presented to the Virginia Bioinformatics Instutute Symposium, Blacksburg, VA, March 2003.
  10. BioSPICE and Problem-Solving Environments for Systems Biology, presented to 22nd Annual Seminar of Cancer Researchers in Virginia, Blacksburg VA, April 13, 2002.

Education-related Presentations

  1. Notes on Graduate School
  2. Introduction to Performance and Computational Complexity (for a non-CS audience)
  3. Pathway Modeling and Problem Solving Environments, presented to CS3824 Introduction to Computational Biology and Bioinformatics, Blacksburg, VA, March 2008.

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