#~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
# User: Set here the F90 compiler and options
#       Pedefined compilers: INTEL, PGF, HPUX, LAHEY
#~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

#COMPILER = G95
#COMPILER = LAHEY
#COMPILER = INTEL
#COMPILER = PGF
#COMPILER = HPUX
COMPILER = GFORTRAN

FC_G95     = g95
FOPT_G95   = -cpp -O -pg -fbounds-check -fimplicit-none  -Wall -ftrace=full

FC_LAHEY   = lf95
# More aggressive for production runs:
#FOPT_LAHEY = -Cpp --pca -O
# More checking for debugging:
FOPT_LAHEY = -Cpp --chk a,e,s,u --pca --ap -O0 -g --trap --trace --chkglobal

FC_INTEL   = ifort 
# More aggressive for production runs:
#FOPT_INTEL = -cpp -O -fp-model precise -pc80 -prec_div
# More checking for debugging:
FOPT_INTEL = -cpp -O0 -fp-model strict -implicitnone -ftrapuv \
              -debug all -check all -warn all

FC_PGF     = pgf90
# More aggressive for production runs:
FOPT_PGF   = -Mpreprocess -O -fast -pc 80 -Kieee
# More checking for debugging:
#FOPT_PGF   = -Mpreprocess -O0 -Mbounds -Mchkfpstk -Mchkptr -Mchkstk \
#             -Ktrap=fp -pc 80 -Kieee

FC_HPUX    = f90
FOPT_HPUX  = -O -u +Oall +check=on

FC_GFORTRAN     = gfortran
FOPT_GFORTRAN   = -cpp -O

# define FULL_ALGEBRA for non-sparse integration
FC   = $(FC_$(COMPILER))
FOPT = $(FOPT_$(COMPILER)) # -DFULL_ALGEBRA

LIBS =
#LIBS = -llapack -lblas

# Command to create Matlab mex gateway routines 
# Note: use $(FC) as the mex Fortran compiler
MEX  = mex

GENSRC = cbm_Precision.f90  \
	 cbm_Parameters.f90     \
	 cbm_Global.f90  

GENOBJ = cbm_Precision.o    \
	 cbm_Parameters.o       \
	 cbm_Global.o     

FUNSRC = cbm_Function.f90 
FUNOBJ = cbm_Function.o 

JACSRC = cbm_JacobianSP.f90  cbm_Jacobian.f90
JACOBJ = cbm_JacobianSP.o    cbm_Jacobian.o

HESSRC = cbm_HessianSP.f90   cbm_Hessian.f90
HESOBJ = cbm_HessianSP.o     cbm_Hessian.o

STMSRC = cbm_StoichiomSP.f90 cbm_Stoichiom.f90 
STMOBJ = cbm_StoichiomSP.o   cbm_Stoichiom.o

UTLSRC = cbm_Rates.f90 cbm_Util.f90 cbm_Monitor.f90
UTLOBJ = cbm_Rates.o   cbm_Util.o   cbm_Monitor.o

LASRC  = cbm_LinearAlgebra.f90 
LAOBJ  = cbm_LinearAlgebra.o   

STOCHSRC = cbm_Stochastic.f90 
STOCHOBJ = cbm_Stochastic.o 

MAINSRC = cbm_Main.f90   cbm_Initialize.f90   cbm_Integrator.f90 cbm_Model.f90
MAINOBJ = cbm_Main.o     cbm_Initialize.o     cbm_Integrator.o   cbm_Model.o 

#~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
# User: modify the line below to include only the
#       objects needed by your application
#~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ALLOBJ = $(GENOBJ) $(FUNOBJ) $(JACOBJ) $(HESOBJ) $(STMOBJ) \
	 $(UTLOBJ) $(LAOBJ)

#~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
# User: modify the line below to include only the
#       executables needed by your application
#~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
all:    exe

exe:	$(ALLOBJ) $(MAINOBJ) 
	$(FC) $(FOPT) $(ALLOBJ) $(MAINOBJ) $(LIBS) -o cbm.exe

stochastic:$(ALLOBJ) $(STOCHOBJ) $(MAINOBJ)
	$(FC) $(FOPT) $(ALLOBJ) $(STOCHOBJ) $(MAINOBJ) $(LIBS) \
	-o cbm_stochastic.exe

mex:    $(ALLOBJ)
	$(MEX) FC#$(FC) -fortran -O cbm_mex_Fun.f90     $(ALLOBJ)
	$(MEX) FC#$(FC) -fortran -O cbm_mex_Jac_SP.f90  $(ALLOBJ)
	$(MEX) FC#$(FC) -fortran -O cbm_mex_Hessian.f90 $(ALLOBJ)

clean:
	rm -f cbm*.o cbm*.mod \
	cbm*.dat cbm.exe cbm*.mexglx \
	cbm.map

distclean:
	rm -f cbm*.o cbm*.mod \
	cbm*.dat cbm.exe cbm.map \
	cbm*.f90 cbm_*.mexglx

cbm_Precision.o: cbm_Precision.f90 
	$(FC) $(FOPT) -c $<

cbm_Parameters.o: cbm_Parameters.f90 \
	            cbm_Precision.o
	$(FC) $(FOPT) -c $<

cbm_Monitor.o: cbm_Monitor.f90 \
	             cbm_Precision.o
	$(FC) $(FOPT) -c $<

cbm_Global.o: cbm_Global.f90 \
	            cbm_Parameters.o cbm_Precision.o
	$(FC) $(FOPT) -c $<

cbm_Initialize.o: cbm_Initialize.f90  $(GENOBJ) 
	$(FC) $(FOPT) -c $<

cbm_Function.o: cbm_Function.f90  $(GENOBJ) 
	$(FC) $(FOPT) -c $<

cbm_Stochastic.o: cbm_Stochastic.f90  $(GENOBJ) 
	$(FC) $(FOPT) -c $<

cbm_JacobianSP.o: cbm_JacobianSP.f90 $(GENOBJ)
	$(FC) $(FOPT) -c $<

cbm_Jacobian.o: cbm_Jacobian.f90  $(GENOBJ) cbm_JacobianSP.o
	$(FC) $(FOPT) -c $<

cbm_LinearAlgebra.o: cbm_LinearAlgebra.f90 $(GENOBJ) cbm_JacobianSP.o
	$(FC) $(FOPT) -c $<

cbm_Rates.o: cbm_Rates.f90  $(GENOBJ) 
	$(FC) $(FOPT) -c $<

cbm_HessianSP.o: cbm_HessianSP.f90  $(GENOBJ)
	$(FC) $(FOPT) -c $<

cbm_Hessian.o:  cbm_Hessian.f90 $(GENOBJ) cbm_HessianSP.o
	$(FC) $(FOPT) -c $<

cbm_StoichiomSP.o: cbm_StoichiomSP.f90 $(GENOBJ)
	$(FC) $(FOPT) -c $<

cbm_Stoichiom.o: cbm_Stoichiom.f90  $(GENOBJ) cbm_StoichiomSP.o
	$(FC) $(FOPT) -c $<

cbm_Util.o: cbm_Util.f90  $(GENOBJ) cbm_Monitor.o
	$(FC) $(FOPT) -c $<

cbm_Main.o: cbm_Main.f90  $(ALLOBJ) cbm_Initialize.o cbm_Model.o cbm_Integrator.o
	$(FC) $(FOPT) -c $<

cbm_Model.o: cbm_Model.f90  $(ALLOBJ) cbm_Integrator.o
	$(FC) $(FOPT) -c $<

cbm_Integrator.o: cbm_Integrator.f90  $(ALLOBJ)
	$(FC) $(FOPT) -c $<